Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Atoh1P48985 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.54□□□□□ -0.24
Atoh1P48985 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Atoh1P48985 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Atoh1P48985 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Atoh1P48985 Gm13351-201ENSMUST00000118087 414 ntBASIC13.54□□□□□ -0.24
Atoh1P48985 Gm14270-201ENSMUST00000118388 846 ntBASIC13.54□□□□□ -0.24
Atoh1P48985 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Atoh1P48985 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Atoh1P48985 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.54□□□□□ -0.24
Atoh1P48985 Gm18561-201ENSMUST00000206027 804 ntBASIC13.54□□□□□ -0.24
Atoh1P48985 Gm44647-201ENSMUST00000207402 428 ntBASIC13.54□□□□□ -0.24
Atoh1P48985 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 CT009546.1-201ENSMUST00000222573 1120 ntBASIC13.54□□□□□ -0.24
Atoh1P48985 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.54□□□□□ -0.24
Atoh1P48985 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Atoh1P48985 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.54□□□□□ -0.24
Atoh1P48985 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Atoh1P48985 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Atoh1P48985 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Atoh1P48985 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atoh1P48985 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Atoh1P48985 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Atoh1P48985 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Atoh1P48985 Gm8451-201ENSMUST00000170338 447 ntBASIC13.53□□□□□ -0.24
Atoh1P48985 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Atoh1P48985 Gm18201-201ENSMUST00000174735 875 ntBASIC13.53□□□□□ -0.24
Atoh1P48985 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.53□□□□□ -0.24
Atoh1P48985 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Gm7536-201ENSMUST00000077389 444 ntBASIC13.53□□□□□ -0.24
Atoh1P48985 Gm5453-201ENSMUST00000080866 447 ntBASIC13.53□□□□□ -0.24
Atoh1P48985 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.53□□□□□ -0.24
Atoh1P48985 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.53□□□□□ -0.24
Atoh1P48985 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atoh1P48985 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atoh1P48985 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atoh1P48985 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Atoh1P48985 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atoh1P48985 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atoh1P48985 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atoh1P48985 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atoh1P48985 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Atoh1P48985 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atoh1P48985 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atoh1P48985 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atoh1P48985 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Atoh1P48985 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Atoh1P48985 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atoh1P48985 Gm14274-201ENSMUST00000117182 615 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm12218-201ENSMUST00000117666 399 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm11979-201ENSMUST00000119629 743 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.52□□□□□ -0.25
Atoh1P48985 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.52□□□□□ -0.25
Atoh1P48985 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atoh1P48985 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.52□□□□□ -0.25
Atoh1P48985 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atoh1P48985 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.52□□□□□ -0.25
Atoh1P48985 Gm28937-201ENSMUST00000185413 695 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm29400-201ENSMUST00000187208 695 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm28662-201ENSMUST00000188446 695 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm28251-201ENSMUST00000188835 695 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.52□□□□□ -0.25
Atoh1P48985 Gm37318-201ENSMUST00000194325 695 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm38017-201ENSMUST00000194768 695 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm37287-201ENSMUST00000195449 695 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm37793-201ENSMUST00000195548 695 ntBASIC13.52□□□□□ -0.25
Atoh1P48985 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms