Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm43852-201ENSMUST00000202098 917 ntBASIC11.43□□□□□ -0.58
Cdx2P43241 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdx2P43241 Gm19009-201ENSMUST00000223072 823 ntBASIC11.43□□□□□ -0.58
Cdx2P43241 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Cdx2P43241 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Cdx2P43241 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cdx2P43241 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.43□□□□□ -0.58
Cdx2P43241 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cdx2P43241 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Cdx2P43241 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cdx2P43241 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Cdx2P43241 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdx2P43241 Gm3150-201ENSMUST00000166418 204 ntBASIC11.42□□□□□ -0.58
Cdx2P43241 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdx2P43241 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.42□□□□□ -0.58
Cdx2P43241 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cdx2P43241 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.42□□□□□ -0.58
Cdx2P43241 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdx2P43241 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.42□□□□□ -0.58
Cdx2P43241 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.42□□□□□ -0.58
Cdx2P43241 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cdx2P43241 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.41□□□□□ -0.58
Cdx2P43241 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdx2P43241 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.41□□□□□ -0.58
Cdx2P43241 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.41□□□□□ -0.58
Cdx2P43241 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cdx2P43241 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.41□□□□□ -0.58
Cdx2P43241 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdx2P43241 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cdx2P43241 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Gm14942-201ENSMUST00000119642 336 ntBASIC11.41□□□□□ -0.58
Cdx2P43241 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.41□□□□□ -0.58
Cdx2P43241 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.41□□□□□ -0.58
Cdx2P43241 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC11.41□□□□□ -0.58
Cdx2P43241 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.41□□□□□ -0.58
Cdx2P43241 Gm24398-201ENSMUST00000157870 109 ntBASIC11.41□□□□□ -0.58
Cdx2P43241 Gm23218-201ENSMUST00000158124 276 ntBASIC11.41□□□□□ -0.58
Cdx2P43241 Gm8531-201ENSMUST00000188319 893 ntBASIC11.41□□□□□ -0.58
Cdx2P43241 Gm44158-201ENSMUST00000203881 505 ntBASIC11.41□□□□□ -0.58
Cdx2P43241 Gm17931-201ENSMUST00000208132 634 ntBASIC11.41□□□□□ -0.58
Cdx2P43241 Gm45594-201ENSMUST00000211717 241 ntBASIC11.41□□□□□ -0.58
Cdx2P43241 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cdx2P43241 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms