Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mir7051-201ENSMUST00000184167 73 ntBASIC12.4□□□□□ -0.42
HttP42859 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
HttP42859 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
HttP42859 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HttP42859 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.43
HttP42859 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HttP42859 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HttP42859 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HttP42859 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
HttP42859 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.4□□□□□ -0.43
HttP42859 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
HttP42859 Gm7928-201ENSMUST00000181249 701 ntBASIC12.4□□□□□ -0.43
HttP42859 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC12.4□□□□□ -0.43
HttP42859 AC107752.1-201ENSMUST00000219362 469 ntBASIC12.4□□□□□ -0.43
HttP42859 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
HttP42859 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.4□□□□□ -0.43
HttP42859 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.39□□□□□ -0.43
HttP42859 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HttP42859 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HttP42859 Mir705-201ENSMUST00000102058 82 ntBASIC12.39□□□□□ -0.43
HttP42859 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Gm25343-201ENSMUST00000157460 107 ntBASIC12.39□□□□□ -0.43
HttP42859 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HttP42859 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HttP42859 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.39□□□□□ -0.43
HttP42859 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Gm8643-201ENSMUST00000195228 625 ntBASIC12.39□□□□□ -0.43
HttP42859 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HttP42859 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.39□□□□□ -0.43
HttP42859 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HttP42859 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HttP42859 Defa-ps16-201ENSMUST00000121939 171 ntBASIC12.38□□□□□ -0.43
HttP42859 Mir7088-201ENSMUST00000184227 86 ntBASIC12.38□□□□□ -0.43
HttP42859 Gm43117-201ENSMUST00000198531 379 ntBASIC12.38□□□□□ -0.43
HttP42859 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HttP42859 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HttP42859 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Gm14176-201ENSMUST00000121302 477 ntBASIC12.38□□□□□ -0.43
HttP42859 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Gm6946-201ENSMUST00000182237 987 ntBASIC12.38□□□□□ -0.43
HttP42859 Gm27316-201ENSMUST00000184884 277 ntBASIC12.38□□□□□ -0.43
HttP42859 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.38□□□□□ -0.43
HttP42859 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC12.38□□□□□ -0.43
HttP42859 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Gm7242-201ENSMUST00000221134 705 ntBASIC12.38□□□□□ -0.43
HttP42859 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.38□□□□□ -0.43
HttP42859 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HttP42859 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HttP42859 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HttP42859 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HttP42859 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.37□□□□□ -0.43
HttP42859 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HttP42859 Gm3828-201ENSMUST00000121817 257 ntBASIC12.37□□□□□ -0.43
HttP42859 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.37□□□□□ -0.43
HttP42859 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC12.37□□□□□ -0.43
HttP42859 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.37□□□□□ -0.43
HttP42859 Gm5254-201ENSMUST00000188353 977 ntBASIC12.37□□□□□ -0.43
HttP42859 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HttP42859 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.37□□□□□ -0.43
HttP42859 Gm5292-201ENSMUST00000073317 580 ntBASIC12.37□□□□□ -0.43
HttP42859 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HttP42859 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HttP42859 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms