Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
BgnP28653 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.12□□□□□ -0.63
BgnP28653 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
BgnP28653 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BgnP28653 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Gm13612-201ENSMUST00000119276 390 ntBASIC11.11□□□□□ -0.63
BgnP28653 Gm13315-201ENSMUST00000120376 991 ntBASIC11.11□□□□□ -0.63
BgnP28653 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.11□□□□□ -0.63
BgnP28653 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.11□□□□□ -0.63
BgnP28653 Gm18304-201ENSMUST00000189162 546 ntBASIC11.11□□□□□ -0.63
BgnP28653 Gm9136-201ENSMUST00000193368 454 ntBASIC11.11□□□□□ -0.63
BgnP28653 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.11□□□□□ -0.63
BgnP28653 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.11□□□□□ -0.63
BgnP28653 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.11□□□□□ -0.63
BgnP28653 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Gm10146-201ENSMUST00000072739 309 ntBASIC11.11□□□□□ -0.63
BgnP28653 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
BgnP28653 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.11□□□□□ -0.63
BgnP28653 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
BgnP28653 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.1□□□□□ -0.63
BgnP28653 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
BgnP28653 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.1□□□□□ -0.63
BgnP28653 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
BgnP28653 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.1□□□□□ -0.63
BgnP28653 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Gm12036-201ENSMUST00000120008 530 ntBASIC11.1□□□□□ -0.63
BgnP28653 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.1□□□□□ -0.63
BgnP28653 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.1□□□□□ -0.63
BgnP28653 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.1□□□□□ -0.63
BgnP28653 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.1□□□□□ -0.63
BgnP28653 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.1□□□□□ -0.63
BgnP28653 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.1□□□□□ -0.63
BgnP28653 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.1□□□□□ -0.63
BgnP28653 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.1□□□□□ -0.63
BgnP28653 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
BgnP28653 Gm8463-201ENSMUST00000208573 613 ntBASIC11.1□□□□□ -0.63
BgnP28653 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.1□□□□□ -0.63
BgnP28653 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.1□□□□□ -0.63
BgnP28653 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.1□□□□□ -0.63
BgnP28653 Gm19163-201ENSMUST00000223313 780 ntBASIC11.1□□□□□ -0.63
BgnP28653 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms