Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Gm28882-201ENSMUST00000185504 314 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.17□□□□□ -0.62
Cd40lgP27548 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.17□□□□□ -0.62
Cd40lgP27548 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.17□□□□□ -0.62
Cd40lgP27548 Gm6082-201ENSMUST00000215204 454 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cd40lgP27548 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.17□□□□□ -0.62
Cd40lgP27548 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.17□□□□□ -0.62
Cd40lgP27548 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cd40lgP27548 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cd40lgP27548 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.16□□□□□ -0.62
Cd40lgP27548 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.16□□□□□ -0.62
Cd40lgP27548 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.16□□□□□ -0.62
Cd40lgP27548 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.16□□□□□ -0.62
Cd40lgP27548 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.16□□□□□ -0.62
Cd40lgP27548 Gm44958-201ENSMUST00000203734 736 ntBASIC11.16□□□□□ -0.62
Cd40lgP27548 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.16□□□□□ -0.62
Cd40lgP27548 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.16□□□□□ -0.62
Cd40lgP27548 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.16□□□□□ -0.62
Cd40lgP27548 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cd40lgP27548 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cd40lgP27548 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm14109-201ENSMUST00000118814 309 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.15□□□□□ -0.62
Cd40lgP27548 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm44651-201ENSMUST00000207343 372 ntBASIC11.15□□□□□ -0.62
Cd40lgP27548 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms