Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clk1P22518 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.33□□□□□ -0.6
Clk1P22518 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clk1P22518 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clk1P22518 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clk1P22518 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clk1P22518 Gm43817-201ENSMUST00000196459 2262 ntBASIC11.33□□□□□ -0.6
Clk1P22518 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clk1P22518 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clk1P22518 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Clk1P22518 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.32□□□□□ -0.6
Clk1P22518 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Clk1P22518 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Clk1P22518 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.32□□□□□ -0.6
Clk1P22518 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Gm11793-201ENSMUST00000120433 981 ntBASIC11.32□□□□□ -0.6
Clk1P22518 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.32□□□□□ -0.6
Clk1P22518 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Clk1P22518 Gm18304-201ENSMUST00000189162 546 ntBASIC11.32□□□□□ -0.6
Clk1P22518 Gm43118-201ENSMUST00000199149 775 ntBASIC11.32□□□□□ -0.6
Clk1P22518 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.32□□□□□ -0.6
Clk1P22518 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Gm18054-201ENSMUST00000207539 555 ntBASIC11.32□□□□□ -0.6
Clk1P22518 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.32□□□□□ -0.6
Clk1P22518 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Clk1P22518 Gm45880-201ENSMUST00000213041 853 ntBASIC11.32□□□□□ -0.6
Clk1P22518 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.32□□□□□ -0.6
Clk1P22518 Gm7046-201ENSMUST00000221351 977 ntBASIC11.32□□□□□ -0.6
Clk1P22518 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Gm10076-201ENSMUST00000073238 384 ntBASIC11.32□□□□□ -0.6
Clk1P22518 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Clk1P22518 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Clk1P22518 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Clk1P22518 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Clk1P22518 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Clk1P22518 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Clk1P22518 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.31□□□□□ -0.6
Clk1P22518 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Clk1P22518 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.31□□□□□ -0.6
Clk1P22518 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.31□□□□□ -0.6
Clk1P22518 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Clk1P22518 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.31□□□□□ -0.6
Clk1P22518 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Clk1P22518 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Gm13316-201ENSMUST00000140537 691 ntBASIC11.31□□□□□ -0.6
Clk1P22518 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.31□□□□□ -0.6
Clk1P22518 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Clk1P22518 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.31□□□□□ -0.6
Clk1P22518 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.31□□□□□ -0.6
Clk1P22518 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Clk1P22518 Gm27243-201ENSMUST00000183964 521 ntBASIC11.31□□□□□ -0.6
Clk1P22518 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.31□□□□□ -0.6
Clk1P22518 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.31□□□□□ -0.6
Clk1P22518 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.31□□□□□ -0.6
Clk1P22518 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Clk1P22518 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Clk1P22518 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms