Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.38□□□□□ -0.59
TP20293 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
TP20293 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TP20293 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.38□□□□□ -0.59
TP20293 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.38□□□□□ -0.59
TP20293 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.38□□□□□ -0.59
TP20293 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
TP20293 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TP20293 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.38□□□□□ -0.59
TP20293 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.38□□□□□ -0.59
TP20293 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TP20293 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.37□□□□□ -0.59
TP20293 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
TP20293 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.37□□□□□ -0.59
TP20293 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.37□□□□□ -0.59
TP20293 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
TP20293 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.37□□□□□ -0.59
TP20293 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.37□□□□□ -0.59
TP20293 Gm24845-201ENSMUST00000158034 109 ntBASIC11.37□□□□□ -0.59
TP20293 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.37□□□□□ -0.59
TP20293 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.37□□□□□ -0.59
TP20293 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TP20293 Gm31256-201ENSMUST00000194705 506 ntBASIC11.37□□□□□ -0.59
TP20293 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.37□□□□□ -0.59
TP20293 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.37□□□□□ -0.59
TP20293 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.37□□□□□ -0.59
TP20293 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
TP20293 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
TP20293 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.36□□□□□ -0.59
TP20293 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.36□□□□□ -0.59
TP20293 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.36□□□□□ -0.59
TP20293 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
TP20293 Gm24255-201ENSMUST00000104481 128 ntBASIC11.36□□□□□ -0.59
TP20293 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.36□□□□□ -0.59
TP20293 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
TP20293 Gm15547-201ENSMUST00000122152 333 ntBASIC11.36□□□□□ -0.59
TP20293 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.36□□□□□ -0.59
TP20293 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
TP20293 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
TP20293 Gm7783-201ENSMUST00000204795 781 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms