Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col3a1P08121 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col3a1P08121 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col3a1P08121 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col3a1P08121 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.2□□□□□ -0.14
Col3a1P08121 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col3a1P08121 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm1848-201ENSMUST00000120711 789 ntBASIC14.2□□□□□ -0.14
Col3a1P08121 Gm9089-201ENSMUST00000122027 526 ntBASIC14.2□□□□□ -0.14
Col3a1P08121 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.2□□□□□ -0.14
Col3a1P08121 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm26047-201ENSMUST00000157308 113 ntBASIC14.2□□□□□ -0.14
Col3a1P08121 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.2□□□□□ -0.14
Col3a1P08121 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm26047-202ENSMUST00000198840 115 ntBASIC14.2□□□□□ -0.14
Col3a1P08121 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC14.2□□□□□ -0.14
Col3a1P08121 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm44315-201ENSMUST00000203041 219 ntBASIC14.2□□□□□ -0.14
Col3a1P08121 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.2□□□□□ -0.14
Col3a1P08121 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.2□□□□□ -0.14
Col3a1P08121 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.2□□□□□ -0.14
Col3a1P08121 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.2□□□□□ -0.14
Col3a1P08121 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Col3a1P08121 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col3a1P08121 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.2□□□□□ -0.14
Col3a1P08121 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Col3a1P08121 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col3a1P08121 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Gm11340-201ENSMUST00000119226 412 ntBASIC14.19□□□□□ -0.14
Col3a1P08121 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.19□□□□□ -0.14
Col3a1P08121 Gm23153-201ENSMUST00000175323 313 ntBASIC14.19□□□□□ -0.14
Col3a1P08121 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.19□□□□□ -0.14
Col3a1P08121 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col3a1P08121 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.19□□□□□ -0.14
Col3a1P08121 Gm7504-201ENSMUST00000201449 424 ntBASIC14.19□□□□□ -0.14
Col3a1P08121 Gm17825-201ENSMUST00000206836 794 ntBASIC14.19□□□□□ -0.14
Col3a1P08121 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC14.19□□□□□ -0.14
Col3a1P08121 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.19□□□□□ -0.14
Col3a1P08121 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col3a1P08121 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col3a1P08121 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.19□□□□□ -0.14
Col3a1P08121 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col3a1P08121 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Col3a1P08121 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.19□□□□□ -0.14
Col3a1P08121 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col3a1P08121 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.19□□□□□ -0.14
Col3a1P08121 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col3a1P08121 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.18□□□□□ -0.14
Col3a1P08121 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col3a1P08121 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col3a1P08121 Gm25072-201ENSMUST00000175233 235 ntBASIC14.18□□□□□ -0.14
Col3a1P08121 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC14.18□□□□□ -0.14
Col3a1P08121 Gm34023-201ENSMUST00000195539 217 ntBASIC14.18□□□□□ -0.14
Col3a1P08121 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col3a1P08121 Gm42657-201ENSMUST00000201746 211 ntBASIC14.18□□□□□ -0.14
Col3a1P08121 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Col3a1P08121 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms