Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Hoxa3P02831 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hoxa3P02831 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.14□□□□□ -0.79
Hoxa3P02831 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Hoxa3P02831 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hoxa3P02831 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Hoxa3P02831 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Hoxa3P02831 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.14□□□□□ -0.79
Hoxa3P02831 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Hoxa3P02831 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Hoxa3P02831 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.13□□□□□ -0.79
Hoxa3P02831 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Hoxa3P02831 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.13□□□□□ -0.79
Hoxa3P02831 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.13□□□□□ -0.79
Hoxa3P02831 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.13□□□□□ -0.79
Hoxa3P02831 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Hoxa3P02831 Gm27552-201ENSMUST00000183351 62 ntBASIC10.13□□□□□ -0.79
Hoxa3P02831 Gm27844-201ENSMUST00000183613 62 ntBASIC10.13□□□□□ -0.79
Hoxa3P02831 Gm9230-201ENSMUST00000188228 532 ntBASIC10.13□□□□□ -0.79
Hoxa3P02831 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.13□□□□□ -0.79
Hoxa3P02831 Gm3786-201ENSMUST00000202659 378 ntBASIC10.13□□□□□ -0.79
Hoxa3P02831 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.13□□□□□ -0.79
Hoxa3P02831 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.13□□□□□ -0.79
Hoxa3P02831 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.13□□□□□ -0.79
Hoxa3P02831 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Hoxa3P02831 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Hoxa3P02831 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.13□□□□□ -0.79
Hoxa3P02831 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Hoxa3P02831 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Gm24934-201ENSMUST00000103764 111 ntBASIC10.12□□□□□ -0.79
Hoxa3P02831 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.12□□□□□ -0.79
Hoxa3P02831 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.12□□□□□ -0.79
Hoxa3P02831 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.12□□□□□ -0.79
Hoxa3P02831 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Gm44958-201ENSMUST00000203734 736 ntBASIC10.12□□□□□ -0.79
Hoxa3P02831 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.12□□□□□ -0.79
Hoxa3P02831 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.12□□□□□ -0.79
Hoxa3P02831 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.12□□□□□ -0.79
Hoxa3P02831 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.12□□□□□ -0.79
Hoxa3P02831 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Hoxa3P02831 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms