Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.54□□□□□ -0.4
Ttc3O88196 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.54□□□□□ -0.4
Ttc3O88196 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ttc3O88196 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.54□□□□□ -0.4
Ttc3O88196 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ttc3O88196 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ttc3O88196 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ttc3O88196 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.54□□□□□ -0.4
Ttc3O88196 Gm5982-201ENSMUST00000196234 512 ntBASIC12.54□□□□□ -0.4
Ttc3O88196 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.54□□□□□ -0.4
Ttc3O88196 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.54□□□□□ -0.4
Ttc3O88196 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ttc3O88196 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.54□□□□□ -0.4
Ttc3O88196 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.54□□□□□ -0.4
Ttc3O88196 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.54□□□□□ -0.4
Ttc3O88196 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ttc3O88196 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.54□□□□□ -0.4
Ttc3O88196 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.53□□□□□ -0.4
Ttc3O88196 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ttc3O88196 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
Ttc3O88196 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ttc3O88196 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm12036-201ENSMUST00000120008 530 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.53□□□□□ -0.4
Ttc3O88196 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.53□□□□□ -0.4
Ttc3O88196 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ttc3O88196 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ttc3O88196 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Mir7076-201ENSMUST00000183519 74 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm28937-201ENSMUST00000185413 695 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm29400-201ENSMUST00000187208 695 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm28662-201ENSMUST00000188446 695 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm28251-201ENSMUST00000188835 695 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm38210-201ENSMUST00000191944 809 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm37318-201ENSMUST00000194325 695 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm38017-201ENSMUST00000194768 695 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm37287-201ENSMUST00000195449 695 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm37793-201ENSMUST00000195548 695 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ttc3O88196 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ttc3O88196 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.53□□□□□ -0.4
Ttc3O88196 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ttc3O88196 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ttc3O88196 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc3O88196 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.52□□□□□ -0.4
Ttc3O88196 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.52□□□□□ -0.4
Ttc3O88196 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.52□□□□□ -0.4
Ttc3O88196 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.52□□□□□ -0.4
Ttc3O88196 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc3O88196 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ttc3O88196 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.52□□□□□ -0.4
Ttc3O88196 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms