Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Smarce1O54941 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Smarce1O54941 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Gm25043-201ENSMUST00000158604 212 ntBASIC14.29□□□□□ -0.12
Smarce1O54941 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.29□□□□□ -0.12
Smarce1O54941 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.29□□□□□ -0.12
Smarce1O54941 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
Smarce1O54941 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smarce1O54941 Gm42498-201ENSMUST00000199981 1372 ntBASIC14.29□□□□□ -0.12
Smarce1O54941 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.29□□□□□ -0.12
Smarce1O54941 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.29□□□□□ -0.12
Smarce1O54941 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.29□□□□□ -0.12
Smarce1O54941 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarce1O54941 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smarce1O54941 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Smarce1O54941 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smarce1O54941 Gm13226-201ENSMUST00000117838 404 ntBASIC14.28□□□□□ -0.12
Smarce1O54941 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Smarce1O54941 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.28□□□□□ -0.12
Smarce1O54941 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.28□□□□□ -0.12
Smarce1O54941 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smarce1O54941 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.28□□□□□ -0.12
Smarce1O54941 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.28□□□□□ -0.12
Smarce1O54941 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.28□□□□□ -0.12
Smarce1O54941 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarce1O54941 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Smarce1O54941 Gm9136-201ENSMUST00000193368 454 ntBASIC14.28□□□□□ -0.12
Smarce1O54941 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Gm44152-201ENSMUST00000205007 1691 ntBASIC14.28□□□□□ -0.12
Smarce1O54941 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarce1O54941 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.28□□□□□ -0.12
Smarce1O54941 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smarce1O54941 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Smarce1O54941 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarce1O54941 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarce1O54941 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.27□□□□□ -0.12
Smarce1O54941 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarce1O54941 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarce1O54941 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarce1O54941 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC14.27□□□□□ -0.12
Smarce1O54941 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC14.27□□□□□ -0.12
Smarce1O54941 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smarce1O54941 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Smarce1O54941 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Smarce1O54941 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Smarce1O54941 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smarce1O54941 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Smarce1O54941 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.27□□□□□ -0.13
Smarce1O54941 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.27□□□□□ -0.13
Smarce1O54941 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Smarce1O54941 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarce1O54941 Gm37008-201ENSMUST00000195712 319 ntBASIC14.27□□□□□ -0.13
Smarce1O54941 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Gm17931-201ENSMUST00000208132 634 ntBASIC14.27□□□□□ -0.13
Smarce1O54941 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Smarce1O54941 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.27□□□□□ -0.13
Smarce1O54941 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Smarce1O54941 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smarce1O54941 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.27□□□□□ -0.13
Smarce1O54941 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Smarce1O54941 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms