Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Gm26232-201ENSMUST00000083360 166 ntBASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Shisa8J3QNX5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.96□□□□□ -0.66
Shisa8J3QNX5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm12314-201ENSMUST00000118104 538 ntBASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm11918-201ENSMUST00000121660 179 ntBASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm44958-201ENSMUST00000203734 736 ntBASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.95□□□□□ -0.66
Shisa8J3QNX5 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.94□□□□□ -0.66
Shisa8J3QNX5 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm5866-201ENSMUST00000177881 973 ntBASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm44405-201ENSMUST00000198952 126 ntBASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Shisa8J3QNX5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms