Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc149F6V035 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.24□□□□□ -0.45
Ccdc149F6V035 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.24□□□□□ -0.45
Ccdc149F6V035 Gm45770-201ENSMUST00000212105 616 ntBASIC12.24□□□□□ -0.45
Ccdc149F6V035 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc149F6V035 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.24□□□□□ -0.45
Ccdc149F6V035 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.23□□□□□ -0.45
Ccdc149F6V035 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gm13263-201ENSMUST00000121271 838 ntBASIC12.23□□□□□ -0.45
Ccdc149F6V035 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gm19459-201ENSMUST00000176240 835 ntBASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.23□□□□□ -0.45
Ccdc149F6V035 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.23□□□□□ -0.45
Ccdc149F6V035 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccdc149F6V035 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms