Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.42□□□□□ -0.1
Ube4aE9Q735 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ube4aE9Q735 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Gm11451-201ENSMUST00000118946 630 ntBASIC14.41□□□□□ -0.1
Ube4aE9Q735 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Gm6485-201ENSMUST00000160676 439 ntBASIC14.41□□□□□ -0.1
Ube4aE9Q735 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.41□□□□□ -0.1
Ube4aE9Q735 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ube4aE9Q735 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Gm12516-201ENSMUST00000120819 385 ntBASIC14.4□□□□□ -0.1
Ube4aE9Q735 Gm14441-201ENSMUST00000121960 540 ntBASIC14.4□□□□□ -0.1
Ube4aE9Q735 Gm7150-201ENSMUST00000122032 981 ntBASIC14.4□□□□□ -0.1
Ube4aE9Q735 Gm8194-201ENSMUST00000159783 859 ntBASIC14.4□□□□□ -0.1
Ube4aE9Q735 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Gm6114-201ENSMUST00000182472 968 ntBASIC14.4□□□□□ -0.1
Ube4aE9Q735 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 CT485606.1-201ENSMUST00000213187 878 ntBASIC14.4□□□□□ -0.1
Ube4aE9Q735 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.4□□□□□ -0.1
Ube4aE9Q735 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.4□□□□□ -0.1
Ube4aE9Q735 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.4□□□□□ -0.1
Ube4aE9Q735 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ube4aE9Q735 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ube4aE9Q735 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ube4aE9Q735 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4aE9Q735 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ube4aE9Q735 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms