Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Gm12887B1AVM1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm24830-201ENSMUST00000102024 166 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm13492-201ENSMUST00000119772 665 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm12363-201ENSMUST00000122250 668 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm18624-201ENSMUST00000220966 658 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm26232-201ENSMUST00000083360 166 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Gm12887B1AVM1 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm8213-201ENSMUST00000118191 441 ntBASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm10156-201ENSMUST00000122364 462 ntBASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Mir6392-201ENSMUST00000184924 108 ntBASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm37917-201ENSMUST00000194711 392 ntBASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm44958-201ENSMUST00000203734 736 ntBASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm4768-201ENSMUST00000206199 686 ntBASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Gm12887B1AVM1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms