Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col4a6B1AVK5 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm12389-201ENSMUST00000117696 418 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm12906-201ENSMUST00000154610 441 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm9369-201ENSMUST00000196009 733 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm42430-201ENSMUST00000197209 616 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm25562-201ENSMUST00000104608 133 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm8111-201ENSMUST00000117659 987 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm6630-201ENSMUST00000119199 454 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm16219-201ENSMUST00000120096 274 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm37852-201ENSMUST00000193027 350 ntBASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.13□□□□□ -0.47
Col4a6B1AVK5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Mir1905-201ENSMUST00000122779 82 ntBASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gm29067-201ENSMUST00000190821 470 ntBASIC12.12□□□□□ -0.47
Col4a6B1AVK5 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a6B1AVK5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms