Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Gm10766-202ENSMUST00000194123 606 ntBASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Gm5864-201ENSMUST00000202263 970 ntBASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Gm44945-201ENSMUST00000206764 1187 ntBASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Gm37015-201ENSMUST00000192763 1521 ntBASIC9.61□□□□□ -0.87
Smco4Q9JIS3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Clec14a-201ENSMUST00000062254 4571 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Smco4Q9JIS3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Mir7071-201ENSMUST00000184847 69 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Gm38144-201ENSMUST00000192790 465 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
Smco4Q9JIS3 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Smco4Q9JIS3 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms