Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Gm15547-201ENSMUST00000122152 333 ntBASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Gm23119-201ENSMUST00000158610 140 ntBASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Gm27023-201ENSMUST00000182372 285 ntBASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tubb3Q9ERD7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm24830-201ENSMUST00000102024 166 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm13736-201ENSMUST00000119272 253 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm8018-201ENSMUST00000173536 789 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm25890-201ENSMUST00000177643 165 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm22614-201ENSMUST00000178300 165 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm22042-201ENSMUST00000082989 165 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm26232-201ENSMUST00000083360 166 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gm26110-201ENSMUST00000083971 165 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubb3Q9ERD7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubb3Q9ERD7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms