Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm24749-201ENSMUST00000157838 343 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm29615-201ENSMUST00000185371 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm28224-201ENSMUST00000186078 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm29001-201ENSMUST00000186177 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm28292-201ENSMUST00000186593 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm28101-201ENSMUST00000187608 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm29076-201ENSMUST00000187689 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm28302-201ENSMUST00000187931 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm28646-201ENSMUST00000188220 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm28205-201ENSMUST00000189177 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm29032-201ENSMUST00000189797 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm28695-201ENSMUST00000190300 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm37448-201ENSMUST00000192795 697 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm18711-201ENSMUST00000199341 750 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm35960-201ENSMUST00000202712 767 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Vps28Q9D1C8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm14028-201ENSMUST00000117434 479 ntBASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm37466-201ENSMUST00000195692 652 ntBASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vps28Q9D1C8 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vps28Q9D1C8 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms