Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm7809-201ENSMUST00000153199 742 ntBASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gm3890-201ENSMUST00000182416 207 ntBASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gm42693-201ENSMUST00000196779 631 ntBASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gm43818-201ENSMUST00000200605 466 ntBASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snf8Q9CZ28 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Gm6222-202ENSMUST00000182143 629 ntBASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.4□□□□□ -0.42
Snf8Q9CZ28 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Snf8Q9CZ28 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Snf8Q9CZ28 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Snf8Q9CZ28 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Snf8Q9CZ28 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Gm13570-201ENSMUST00000140763 309 ntBASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Snf8Q9CZ28 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms