Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.16□□□□□ -0.14
Smc3Q9CW03 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smc3Q9CW03 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm10434-201ENSMUST00000101158 471 ntBASIC14.16□□□□□ -0.14
Smc3Q9CW03 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.16□□□□□ -0.14
Smc3Q9CW03 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm18711-201ENSMUST00000199341 750 ntBASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.16□□□□□ -0.14
Smc3Q9CW03 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smc3Q9CW03 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gm22018-201ENSMUST00000104357 131 ntBASIC14.15□□□□□ -0.14
Smc3Q9CW03 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Rprl1-201ENSMUST00000158050 327 ntBASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gm25043-201ENSMUST00000158604 212 ntBASIC14.15□□□□□ -0.14
Smc3Q9CW03 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.15□□□□□ -0.14
Smc3Q9CW03 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gm9136-201ENSMUST00000193368 454 ntBASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.15□□□□□ -0.14
Smc3Q9CW03 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smc3Q9CW03 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Smc3Q9CW03 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smc3Q9CW03 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smc3Q9CW03 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Gm37131-201ENSMUST00000192502 1561 ntBASIC14.14□□□□□ -0.15
Smc3Q9CW03 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.14□□□□□ -0.15
Smc3Q9CW03 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.14□□□□□ -0.15
Smc3Q9CW03 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Gm27514-201ENSMUST00000183692 110 ntBASIC14.14□□□□□ -0.15
Smc3Q9CW03 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Smc3Q9CW03 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms