Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RtcbQ99LF4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RtcbQ99LF4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RtcbQ99LF4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RtcbQ99LF4 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RtcbQ99LF4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RtcbQ99LF4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RtcbQ99LF4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Gm12783-201ENSMUST00000121425 397 ntBASIC14.83□□□□□ -0.04
RtcbQ99LF4 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC14.83□□□□□ -0.04
RtcbQ99LF4 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.83□□□□□ -0.04
RtcbQ99LF4 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.83□□□□□ -0.04
RtcbQ99LF4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RtcbQ99LF4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC14.83□□□□□ -0.04
RtcbQ99LF4 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.82□□□□□ -0.04
RtcbQ99LF4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.82□□□□□ -0.04
RtcbQ99LF4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gm14807-201ENSMUST00000116640 983 ntBASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gm14892-201ENSMUST00000117636 267 ntBASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gm15615-201ENSMUST00000118876 198 ntBASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gm7940-201ENSMUST00000218195 769 ntBASIC14.82□□□□□ -0.04
RtcbQ99LF4 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.82□□□□□ -0.04
RtcbQ99LF4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
RtcbQ99LF4 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RtcbQ99LF4 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms