Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Thumpd1Q99J36 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Thumpd1Q99J36 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Thumpd1Q99J36 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Thumpd1Q99J36 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Thumpd1Q99J36 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm24934-201ENSMUST00000103764 111 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm12502-201ENSMUST00000120197 444 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm11918-201ENSMUST00000121660 179 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm27023-201ENSMUST00000182372 285 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm38241-201ENSMUST00000192641 898 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm18584-201ENSMUST00000203098 964 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm2423-201ENSMUST00000074863 733 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Thumpd1Q99J36 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Gm27486-201ENSMUST00000184923 80 ntBASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.72□□□□□ -0.69
Thumpd1Q99J36 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.72□□□□□ -0.69
Thumpd1Q99J36 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Thumpd1Q99J36 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms