Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm13182-201ENSMUST00000122241 312 ntBASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm3793-201ENSMUST00000204973 672 ntBASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm18041-201ENSMUST00000218210 618 ntBASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdhac2Q91Y09 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Gm29499-201ENSMUST00000189151 486 ntBASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Gm28329-201ENSMUST00000191208 689 ntBASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Gm29171-201ENSMUST00000191397 486 ntBASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Gm13384-201ENSMUST00000117166 1344 ntBASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdhac2Q91Y09 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdhac2Q91Y09 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdhac2Q91Y09 Gm6407-201ENSMUST00000176468 549 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms