Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdhb6Q91XZ4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Gm11511-201ENSMUST00000118146 540 ntBASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Gm14441-201ENSMUST00000121960 540 ntBASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb6Q91XZ4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb6Q91XZ4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb6Q91XZ4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms