Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm42657-201ENSMUST00000201746 211 ntBASIC11.96□□□□□ -0.49
Vsx1Q91V10 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm44980-201ENSMUST00000205826 314 ntBASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm4157-201ENSMUST00000211647 679 ntBASIC11.96□□□□□ -0.49
Vsx1Q91V10 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm8325-201ENSMUST00000099086 453 ntBASIC11.96□□□□□ -0.49
Vsx1Q91V10 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.96□□□□□ -0.49
Vsx1Q91V10 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vsx1Q91V10 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.96□□□□□ -0.5
Vsx1Q91V10 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.96□□□□□ -0.5
Vsx1Q91V10 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vsx1Q91V10 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.96□□□□□ -0.5
Vsx1Q91V10 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm24934-201ENSMUST00000103764 111 ntBASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm16071-201ENSMUST00000119589 793 ntBASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm15703-201ENSMUST00000120250 880 ntBASIC11.95□□□□□ -0.5
Vsx1Q91V10 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm17826-201ENSMUST00000189720 798 ntBASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vsx1Q91V10 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vsx1Q91V10 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms