Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm9034-201ENSMUST00000182071 1005 ntBASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Gm44980-201ENSMUST00000205826 314 ntBASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Gm18636-201ENSMUST00000218846 1066 ntBASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Chmp7Q8R1T1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Gm4654-201ENSMUST00000183305 982 ntBASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Gm37299-201ENSMUST00000193951 826 ntBASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Gm9645-201ENSMUST00000197131 792 ntBASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chmp7Q8R1T1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Ighv5-11-201ENSMUST00000193354 371 ntBASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chmp7Q8R1T1 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Chmp7Q8R1T1 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms