Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.38□□□□□ -0.59
Clrn1Q8K445 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Clrn1Q8K445 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Clrn1Q8K445 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.37□□□□□ -0.59
Clrn1Q8K445 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm44651-201ENSMUST00000207343 372 ntBASIC11.37□□□□□ -0.59
Clrn1Q8K445 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Clrn1Q8K445 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.36□□□□□ -0.59
Clrn1Q8K445 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Gm7722-201ENSMUST00000120646 741 ntBASIC11.36□□□□□ -0.59
Clrn1Q8K445 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Gm15276-201ENSMUST00000145953 498 ntBASIC11.36□□□□□ -0.59
Clrn1Q8K445 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Gm8885-201ENSMUST00000189382 598 ntBASIC11.36□□□□□ -0.59
Clrn1Q8K445 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.36□□□□□ -0.59
Clrn1Q8K445 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Clrn1Q8K445 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms