Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Zc3h3Q8CHP0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Gm43671-201ENSMUST00000200422 433 ntBASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Gm7904-201ENSMUST00000217049 465 ntBASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Zc3h3Q8CHP0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Gm11783-201ENSMUST00000119549 885 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Gm9166-201ENSMUST00000120293 561 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Gm12906-201ENSMUST00000154610 441 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Gm45085-201ENSMUST00000209100 441 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Zc3h3Q8CHP0 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Zc3h3Q8CHP0 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zc3h3Q8CHP0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Zc3h3Q8CHP0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Zc3h3Q8CHP0 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms