Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Gm37201-201ENSMUST00000191845 523 ntBASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Gm9136-201ENSMUST00000193368 454 ntBASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Gm9794-201ENSMUST00000202370 423 ntBASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28aQ8CEI3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Gm4984-201ENSMUST00000115987 360 ntBASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc28aQ8CEI3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Gm12058-201ENSMUST00000118614 437 ntBASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Gm25927-201ENSMUST00000175058 117 ntBASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc28aQ8CEI3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms