Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.02□□□□□ -0.16
Alx1Q8C8B0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Alx1Q8C8B0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Gm7851-201ENSMUST00000117574 323 ntBASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Gm12501-201ENSMUST00000119163 529 ntBASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Gm16570-201ENSMUST00000161951 436 ntBASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Gm38314-201ENSMUST00000195709 625 ntBASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx1Q8C8B0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Gm11941-201ENSMUST00000119904 610 ntBASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx1Q8C8B0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14□□□□□ -0.17
Alx1Q8C8B0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14□□□□□ -0.17
Alx1Q8C8B0 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx1Q8C8B0 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Alx1Q8C8B0 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx1Q8C8B0 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx1Q8C8B0 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Alx1Q8C8B0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx1Q8C8B0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Alx1Q8C8B0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Alx1Q8C8B0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx1Q8C8B0 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx1Q8C8B0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx1Q8C8B0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Alx1Q8C8B0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms