Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Gm22018-201ENSMUST00000104357 131 ntBASIC10.8□□□□□ -0.68
Rft1Q8C3B8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Gm35960-201ENSMUST00000202712 767 ntBASIC10.8□□□□□ -0.68
Rft1Q8C3B8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Rft1Q8C3B8 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.8□□□□□ -0.68
Rft1Q8C3B8 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm11591-201ENSMUST00000120063 702 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm6222-202ENSMUST00000182143 629 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm38002-201ENSMUST00000193255 180 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm18054-201ENSMUST00000207539 555 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm6013-201ENSMUST00000212264 699 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Mir339-201ENSMUST00000083659 96 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rft1Q8C3B8 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rft1Q8C3B8 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms