Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Slc5a7Q8BGY9 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Slc5a7Q8BGY9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Gm24830-201ENSMUST00000102024 166 ntBASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Gm44958-201ENSMUST00000203734 736 ntBASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Gm26232-201ENSMUST00000083360 166 ntBASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Slc5a7Q8BGY9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Gm28631-201ENSMUST00000190740 334 ntBASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Slc5a7Q8BGY9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms