Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Gm10731-201ENSMUST00000181171 448 ntBASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Gm29155-201ENSMUST00000185910 269 ntBASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Gm7593-201ENSMUST00000187246 644 ntBASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.32□□□□□ -0.28
Usp6nlQ80XC3 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gm15207-201ENSMUST00000119259 442 ntBASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Usp6nlQ80XC3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Gm11675-201ENSMUST00000121873 832 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Gm21092-201ENSMUST00000178995 955 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Gm29499-201ENSMUST00000189151 486 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Gm28329-201ENSMUST00000191208 689 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Gm29171-201ENSMUST00000191397 486 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Usp6nlQ80XC3 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms