Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Gm12266-201ENSMUST00000120311 962 ntBASIC12.47□□□□□ -0.41
Trim62Q80V85 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.47□□□□□ -0.41
Trim62Q80V85 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.47□□□□□ -0.41
Trim62Q80V85 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Gm26448-201ENSMUST00000082446 203 ntBASIC12.47□□□□□ -0.41
Trim62Q80V85 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim62Q80V85 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim62Q80V85 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.46□□□□□ -0.41
Trim62Q80V85 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.46□□□□□ -0.41
Trim62Q80V85 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.46□□□□□ -0.41
Trim62Q80V85 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Gm35960-201ENSMUST00000202712 767 ntBASIC12.46□□□□□ -0.41
Trim62Q80V85 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.46□□□□□ -0.41
Trim62Q80V85 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trim62Q80V85 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim62Q80V85 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim62Q80V85 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim62Q80V85 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim62Q80V85 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
Trim62Q80V85 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trim62Q80V85 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trim62Q80V85 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim62Q80V85 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trim62Q80V85 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Trim62Q80V85 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim62Q80V85 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim62Q80V85 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim62Q80V85 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim62Q80V85 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Trim62Q80V85 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim62Q80V85 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim62Q80V85 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trim62Q80V85 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 Gm14028-201ENSMUST00000117434 479 ntBASIC12.45□□□□□ -0.42
Trim62Q80V85 Gm15711-201ENSMUST00000118889 535 ntBASIC12.45□□□□□ -0.42
Trim62Q80V85 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim62Q80V85 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim62Q80V85 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim62Q80V85 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.45□□□□□ -0.42
Trim62Q80V85 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms