Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
NipblQ6KCD5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
NipblQ6KCD5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
NipblQ6KCD5 Gm8731-201ENSMUST00000118088 412 ntBASIC9.18□□□□□ -0.94
NipblQ6KCD5 Gm9135-201ENSMUST00000182963 990 ntBASIC9.18□□□□□ -0.94
NipblQ6KCD5 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
NipblQ6KCD5 Gm45758-201ENSMUST00000212448 1006 ntBASIC9.18□□□□□ -0.94
NipblQ6KCD5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.18□□□□□ -0.94
NipblQ6KCD5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
NipblQ6KCD5 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Mir705-201ENSMUST00000102058 82 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm15626-201ENSMUST00000117478 868 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm6946-201ENSMUST00000182237 987 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm2566-201ENSMUST00000201267 431 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm3433-201ENSMUST00000210149 1058 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm9797-202ENSMUST00000218003 294 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm12164-201ENSMUST00000121695 551 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm14760-201ENSMUST00000121831 999 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm19587-201ENSMUST00000191395 545 ntBASIC9.17□□□□□ -0.94
NipblQ6KCD5 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
NipblQ6KCD5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.16□□□□□ -0.94
NipblQ6KCD5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.16□□□□□ -0.94
NipblQ6KCD5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC9.16□□□□□ -0.94
NipblQ6KCD5 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
NipblQ6KCD5 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms