Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Nr1h4Q60641 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gm12502-201ENSMUST00000120197 444 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gm5781-201ENSMUST00000219792 443 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gm10076-201ENSMUST00000073238 384 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.51□□□□□ -0.57
Nr1h4Q60641 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nr1h4Q60641 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.5□□□□□ -0.57
Nr1h4Q60641 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.5□□□□□ -0.57
Nr1h4Q60641 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Gm23912-201ENSMUST00000104687 87 ntBASIC11.5□□□□□ -0.57
Nr1h4Q60641 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.5□□□□□ -0.57
Nr1h4Q60641 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.5□□□□□ -0.57
Nr1h4Q60641 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Gm7561-201ENSMUST00000211203 886 ntBASIC11.5□□□□□ -0.57
Nr1h4Q60641 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.5□□□□□ -0.57
Nr1h4Q60641 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nr1h4Q60641 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms