Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm11439-201ENSMUST00000118598 409 ntBASIC14.06□□□□□ -0.16
Prdm1Q60636 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm14277-201ENSMUST00000121195 360 ntBASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC14.06□□□□□ -0.16
Prdm1Q60636 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.06□□□□□ -0.16
Prdm1Q60636 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.06□□□□□ -0.16
Prdm1Q60636 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.06□□□□□ -0.16
Prdm1Q60636 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.06□□□□□ -0.16
Prdm1Q60636 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.06□□□□□ -0.16
Prdm1Q60636 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.06□□□□□ -0.16
Prdm1Q60636 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prdm1Q60636 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Prdm1Q60636 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.05□□□□□ -0.16
Prdm1Q60636 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.05□□□□□ -0.16
Prdm1Q60636 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.05□□□□□ -0.16
Prdm1Q60636 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Gm22133-201ENSMUST00000102082 109 ntBASIC14.05□□□□□ -0.16
Prdm1Q60636 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Prdm1Q60636 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.05□□□□□ -0.16
Prdm1Q60636 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.05□□□□□ -0.16
Prdm1Q60636 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.05□□□□□ -0.16
Prdm1Q60636 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Prdm1Q60636 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.05□□□□□ -0.16
Prdm1Q60636 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Prdm1Q60636 Gm17827-201ENSMUST00000211825 742 ntBASIC14.05□□□□□ -0.16
Prdm1Q60636 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Prdm1Q60636 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.05□□□□□ -0.16
Prdm1Q60636 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.05□□□□□ -0.16
Prdm1Q60636 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prdm1Q60636 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Prdm1Q60636 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Gm23949-201ENSMUST00000104027 127 ntBASIC14.04□□□□□ -0.16
Prdm1Q60636 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.04□□□□□ -0.16
Prdm1Q60636 Gm14028-201ENSMUST00000117434 479 ntBASIC14.04□□□□□ -0.16
Prdm1Q60636 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Prdm1Q60636 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.04□□□□□ -0.16
Prdm1Q60636 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prdm1Q60636 Gm18212-201ENSMUST00000211678 889 ntBASIC14.04□□□□□ -0.16
Prdm1Q60636 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms