Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rnf20Q5DTM8 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Gm14109-201ENSMUST00000118814 309 ntBASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Mir8109-201ENSMUST00000184375 117 ntBASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Gm19187-201ENSMUST00000206781 892 ntBASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 AC132260.2-201ENSMUST00000224482 344 ntBASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rnf20Q5DTM8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Gm6963-201ENSMUST00000147879 379 ntBASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Gm38241-201ENSMUST00000192641 898 ntBASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Gm44364-201ENSMUST00000198368 141 ntBASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Gm9899-201ENSMUST00000065519 555 ntBASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rnf20Q5DTM8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC14.34□□□□□ -0.11
Rnf20Q5DTM8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms