Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Mir6359-201ENSMUST00000183668 81 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Gm45113-201ENSMUST00000207518 165 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm15617-201ENSMUST00000118973 771 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm5190-201ENSMUST00000192434 357 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm9487-201ENSMUST00000216600 472 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm14497-201ENSMUST00000119537 580 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Defa-ps16-201ENSMUST00000121939 171 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm37365-201ENSMUST00000193109 409 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 AC129017.2-201ENSMUST00000226118 1284 ntBASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Spg11Q3UHA3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Gm9089-201ENSMUST00000122027 526 ntBASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Gm17541-201ENSMUST00000080062 525 ntBASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Spg11Q3UHA3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms