Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trim43aQ3TL54 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Gm13736-201ENSMUST00000119272 253 ntBASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Gm12502-201ENSMUST00000120197 444 ntBASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Gm1335-201ENSMUST00000121653 386 ntBASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Gm39404-201ENSMUST00000216350 313 ntBASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim43aQ3TL54 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gm8062-201ENSMUST00000139696 444 ntBASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gm5781-201ENSMUST00000219792 443 ntBASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.78□□□□□ -0.36
Trim43aQ3TL54 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.77□□□□□ -0.36
Trim43aQ3TL54 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43aQ3TL54 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trim43aQ3TL54 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim43aQ3TL54 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms