Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 CT025689.1-201ENSMUST00000225214 283 ntBASIC14.9□□□□□ -0.02
Cacna1sQ02789 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cacna1sQ02789 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cacna1sQ02789 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cacna1sQ02789 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1sQ02789 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1sQ02789 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1sQ02789 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1sQ02789 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cacna1sQ02789 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cacna1sQ02789 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Gm44190-201ENSMUST00000205083 1401 ntBASIC14.89□□□□□ -0.03
Cacna1sQ02789 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Gm14071-201ENSMUST00000117817 509 ntBASIC14.89□□□□□ -0.03
Cacna1sQ02789 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Gm9102-201ENSMUST00000219250 465 ntBASIC14.89□□□□□ -0.03
Cacna1sQ02789 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.89□□□□□ -0.03
Cacna1sQ02789 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Gm23595-201ENSMUST00000104306 130 ntBASIC14.89□□□□□ -0.03
Cacna1sQ02789 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC14.89□□□□□ -0.03
Cacna1sQ02789 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cacna1sQ02789 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Matn2-206ENSMUST00000228570 2798 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 AC154354.1-203ENSMUST00000225565 1364 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Snord23-201ENSMUST00000116828 109 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Gm25872-201ENSMUST00000177784 100 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Mir6359-201ENSMUST00000183668 81 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Gm20781-201ENSMUST00000193154 693 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Gm21736-201ENSMUST00000195399 693 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Gm43547-201ENSMUST00000197729 328 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Id2-203ENSMUST00000222667 958 ntBASIC14.88□□□□□ -0.03
Cacna1sQ02789 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cacna1sQ02789 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cacna1sQ02789 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1sQ02789 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1sQ02789 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1sQ02789 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1sQ02789 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1sQ02789 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1sQ02789 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cacna1sQ02789 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms