Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a1Q00780 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.33□□□□□ -0.76
Col8a1Q00780 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.32□□□□□ -0.76
Col8a1Q00780 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.32□□□□□ -0.76
Col8a1Q00780 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.32□□□□□ -0.76
Col8a1Q00780 Gm2875-201ENSMUST00000211333 360 ntBASIC10.32□□□□□ -0.76
Col8a1Q00780 Gm4157-201ENSMUST00000211647 679 ntBASIC10.32□□□□□ -0.76
Col8a1Q00780 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Col8a1Q00780 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a1Q00780 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Col8a1Q00780 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a1Q00780 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms