Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.24□□□□□ -0.29
Lig3P97386 Gm25043-201ENSMUST00000158604 212 ntBASIC13.24□□□□□ -0.29
Lig3P97386 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.24□□□□□ -0.29
Lig3P97386 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.24□□□□□ -0.29
Lig3P97386 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Lig3P97386 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.24□□□□□ -0.29
Lig3P97386 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.24□□□□□ -0.29
Lig3P97386 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.24□□□□□ -0.29
Lig3P97386 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Lig3P97386 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.23□□□□□ -0.29
Lig3P97386 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.23□□□□□ -0.29
Lig3P97386 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.23□□□□□ -0.29
Lig3P97386 Gm24749-201ENSMUST00000157838 343 ntBASIC13.23□□□□□ -0.29
Lig3P97386 Gm19459-201ENSMUST00000176240 835 ntBASIC13.23□□□□□ -0.29
Lig3P97386 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.23□□□□□ -0.29
Lig3P97386 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.23□□□□□ -0.29
Lig3P97386 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Gm7848-201ENSMUST00000210739 718 ntBASIC13.23□□□□□ -0.29
Lig3P97386 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.23□□□□□ -0.29
Lig3P97386 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.23□□□□□ -0.29
Lig3P97386 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.23□□□□□ -0.29
Lig3P97386 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Lig3P97386 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Lig3P97386 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Lig3P97386 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Lig3P97386 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lig3P97386 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.22□□□□□ -0.29
Lig3P97386 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.22□□□□□ -0.29
Lig3P97386 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Lig3P97386 Gm12058-201ENSMUST00000118614 437 ntBASIC13.22□□□□□ -0.29
Lig3P97386 Gm18734-201ENSMUST00000172937 808 ntBASIC13.22□□□□□ -0.29
Lig3P97386 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.22□□□□□ -0.29
Lig3P97386 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.22□□□□□ -0.29
Lig3P97386 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.22□□□□□ -0.29
Lig3P97386 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lig3P97386 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms