Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim43cP86449 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.12□□□□□ -0.31
Trim43cP86449 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43cP86449 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Gm15610-201ENSMUST00000120584 195 ntBASIC13.11□□□□□ -0.31
Trim43cP86449 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.11□□□□□ -0.31
Trim43cP86449 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.11□□□□□ -0.31
Trim43cP86449 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43cP86449 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.11□□□□□ -0.31
Trim43cP86449 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim43cP86449 Gm5616-201ENSMUST00000165252 384 ntBASIC13.11□□□□□ -0.31
Trim43cP86449 Gm8741-201ENSMUST00000174736 384 ntBASIC13.11□□□□□ -0.31
Trim43cP86449 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.11□□□□□ -0.31
Trim43cP86449 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.11□□□□□ -0.31
Trim43cP86449 Gm6082-201ENSMUST00000215204 454 ntBASIC13.11□□□□□ -0.31
Trim43cP86449 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.11□□□□□ -0.31
Trim43cP86449 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Trim43cP86449 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trim43cP86449 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Trim43cP86449 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim43cP86449 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.1□□□□□ -0.31
Trim43cP86449 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trim43cP86449 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trim43cP86449 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.1□□□□□ -0.31
Trim43cP86449 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.1□□□□□ -0.31
Trim43cP86449 Gm11511-201ENSMUST00000118146 540 ntBASIC13.1□□□□□ -0.31
Trim43cP86449 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.1□□□□□ -0.31
Trim43cP86449 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43cP86449 Gm38241-201ENSMUST00000192641 898 ntBASIC13.1□□□□□ -0.31
Trim43cP86449 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.1□□□□□ -0.31
Trim43cP86449 Gm8913-201ENSMUST00000209491 641 ntBASIC13.1□□□□□ -0.31
Trim43cP86449 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.1□□□□□ -0.31
Trim43cP86449 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.1□□□□□ -0.31
Trim43cP86449 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43cP86449 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43cP86449 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43cP86449 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43cP86449 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim43cP86449 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim43cP86449 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43cP86449 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim43cP86449 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43cP86449 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim43cP86449 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms