Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm16296-201ENSMUST00000159905 325 ntBASIC12.43□□□□□ -0.42
Trim43bP86448 Gm10608-202ENSMUST00000213924 676 ntBASIC12.43□□□□□ -0.42
Trim43bP86448 Gm32025-201ENSMUST00000217960 307 ntBASIC12.43□□□□□ -0.42
Trim43bP86448 Gm45930-201ENSMUST00000221330 292 ntBASIC12.43□□□□□ -0.42
Trim43bP86448 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Trim43bP86448 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.43□□□□□ -0.42
Trim43bP86448 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim43bP86448 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim43bP86448 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.43□□□□□ -0.42
Trim43bP86448 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.43□□□□□ -0.42
Trim43bP86448 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43bP86448 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43bP86448 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43bP86448 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43bP86448 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43bP86448 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43bP86448 Snord83b-201ENSMUST00000104546 94 ntBASIC12.42□□□□□ -0.42
Trim43bP86448 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim43bP86448 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.42□□□□□ -0.42
Trim43bP86448 Gm8738-201ENSMUST00000172606 329 ntBASIC12.42□□□□□ -0.42
Trim43bP86448 Gm27516-201ENSMUST00000184237 98 ntBASIC12.42□□□□□ -0.42
Trim43bP86448 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim43bP86448 Gm44882-201ENSMUST00000205702 802 ntBASIC12.42□□□□□ -0.42
Trim43bP86448 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Gm9257-201ENSMUST00000221254 232 ntBASIC12.42□□□□□ -0.42
Trim43bP86448 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim43bP86448 Gm24526-201ENSMUST00000082921 158 ntBASIC12.42□□□□□ -0.42
Trim43bP86448 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.42□□□□□ -0.42
Trim43bP86448 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim43bP86448 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.42□□□□□ -0.42
Trim43bP86448 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim43bP86448 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim43bP86448 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim43bP86448 Gm12502-201ENSMUST00000120197 444 ntBASIC12.41□□□□□ -0.42
Trim43bP86448 Gm11964-201ENSMUST00000120982 444 ntBASIC12.41□□□□□ -0.42
Trim43bP86448 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.41□□□□□ -0.42
Trim43bP86448 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim43bP86448 Gm38158-201ENSMUST00000194617 339 ntBASIC12.41□□□□□ -0.42
Trim43bP86448 Gm38341-201ENSMUST00000195357 515 ntBASIC12.41□□□□□ -0.42
Trim43bP86448 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim43bP86448 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.41□□□□□ -0.42
Trim43bP86448 Morn2-202ENSMUST00000227729 656 ntBASIC12.41□□□□□ -0.42
Trim43bP86448 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim43bP86448 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms