Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.89□□□□□ -0.51
Shox2P70390 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Shox2P70390 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Shox2P70390 Gm8018-201ENSMUST00000173536 789 ntBASIC11.89□□□□□ -0.51
Shox2P70390 Lect2-202ENSMUST00000225183 823 ntBASIC11.89□□□□□ -0.51
Shox2P70390 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.89□□□□□ -0.51
Shox2P70390 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Shox2P70390 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.89□□□□□ -0.51
Shox2P70390 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Shox2P70390 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Shox2P70390 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Shox2P70390 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Shox2P70390 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.88□□□□□ -0.51
Shox2P70390 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.88□□□□□ -0.51
Shox2P70390 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Shox2P70390 Gm26185-201ENSMUST00000157692 266 ntBASIC11.88□□□□□ -0.51
Shox2P70390 Gm27838-201ENSMUST00000184829 128 ntBASIC11.88□□□□□ -0.51
Shox2P70390 Gm2756-201ENSMUST00000195851 400 ntBASIC11.88□□□□□ -0.51
Shox2P70390 Gm18307-201ENSMUST00000206864 949 ntBASIC11.88□□□□□ -0.51
Shox2P70390 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Shox2P70390 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Shox2P70390 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Shox2P70390 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Shox2P70390 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Shox2P70390 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Shox2P70390 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.87□□□□□ -0.51
Shox2P70390 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Shox2P70390 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.87□□□□□ -0.51
Shox2P70390 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Shox2P70390 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.87□□□□□ -0.51
Shox2P70390 Gm12341-201ENSMUST00000119724 503 ntBASIC11.87□□□□□ -0.51
Shox2P70390 Gm2231-201ENSMUST00000125661 612 ntBASIC11.87□□□□□ -0.51
Shox2P70390 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Shox2P70390 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.87□□□□□ -0.51
Shox2P70390 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Gm37922-201ENSMUST00000195596 455 ntBASIC11.87□□□□□ -0.51
Shox2P70390 Gm6439-201ENSMUST00000199849 862 ntBASIC11.87□□□□□ -0.51
Shox2P70390 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.87□□□□□ -0.51
Shox2P70390 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.87□□□□□ -0.51
Shox2P70390 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Shox2P70390 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Shox2P70390 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Shox2P70390 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms