Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Crnkl1P63154 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Crnkl1P63154 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Crnkl1P63154 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Crnkl1P63154 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Crnkl1P63154 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Crnkl1P63154 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.94□□□□□ -0.5
Crnkl1P63154 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.94□□□□□ -0.5
Crnkl1P63154 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.94□□□□□ -0.5
Crnkl1P63154 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.94□□□□□ -0.5
Crnkl1P63154 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Crnkl1P63154 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.94□□□□□ -0.5
Crnkl1P63154 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Gm29649-201ENSMUST00000185649 419 ntBASIC11.93□□□□□ -0.5
Crnkl1P63154 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Gm6266-201ENSMUST00000203844 806 ntBASIC11.93□□□□□ -0.5
Crnkl1P63154 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Mir339-201ENSMUST00000083659 96 ntBASIC11.93□□□□□ -0.5
Crnkl1P63154 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.93□□□□□ -0.5
Crnkl1P63154 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Crnkl1P63154 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Crnkl1P63154 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.92□□□□□ -0.5
Crnkl1P63154 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.92□□□□□ -0.5
Crnkl1P63154 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Gm16202-201ENSMUST00000117532 544 ntBASIC11.92□□□□□ -0.5
Crnkl1P63154 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.92□□□□□ -0.5
Crnkl1P63154 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.92□□□□□ -0.5
Crnkl1P63154 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.92□□□□□ -0.5
Crnkl1P63154 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.92□□□□□ -0.5
Crnkl1P63154 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.92□□□□□ -0.5
Crnkl1P63154 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Crnkl1P63154 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms