Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC8.57□□□□□ -1.04
Rpl39P62892 Gm37497-201ENSMUST00000195830 798 ntBASIC8.57□□□□□ -1.04
Rpl39P62892 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Gm19163-201ENSMUST00000223313 780 ntBASIC8.57□□□□□ -1.04
Rpl39P62892 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rpl39P62892 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rpl39P62892 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Rpl39P62892 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Rpl39P62892 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC8.57□□□□□ -1.04
Rpl39P62892 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Rpl39P62892 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Rpl39P62892 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rpl39P62892 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Gm37827-201ENSMUST00000194486 1542 ntBASIC8.56□□□□□ -1.04
Rpl39P62892 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rpl39P62892 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Rpl39P62892 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Gm11803-201ENSMUST00000119966 444 ntBASIC8.56□□□□□ -1.04
Rpl39P62892 Gm13315-201ENSMUST00000120376 991 ntBASIC8.56□□□□□ -1.04
Rpl39P62892 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Rpl39P62892 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC8.56□□□□□ -1.04
Rpl39P62892 Gm23119-201ENSMUST00000158610 140 ntBASIC8.56□□□□□ -1.04
Rpl39P62892 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC8.56□□□□□ -1.04
Rpl39P62892 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Gm6473-201ENSMUST00000188572 1210 ntBASIC8.56□□□□□ -1.04
Rpl39P62892 Gm18304-201ENSMUST00000189162 546 ntBASIC8.56□□□□□ -1.04
Rpl39P62892 Gm4768-201ENSMUST00000206199 686 ntBASIC8.56□□□□□ -1.04
Rpl39P62892 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC8.56□□□□□ -1.04
Rpl39P62892 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Rpl39P62892 AC108416.1-202ENSMUST00000228927 1201 ntBASIC8.56□□□□□ -1.04
Rpl39P62892 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Rpl39P62892 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC8.56□□□□□ -1.04
Rpl39P62892 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Rpl39P62892 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC8.55□□□□□ -1.04
Rpl39P62892 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Rpl39P62892 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC8.55□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms