Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.72□□□□□ -0.85
Lmo4P61969 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Lmo4P61969 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.72□□□□□ -0.85
Lmo4P61969 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Gm22711-201ENSMUST00000116890 133 ntBASIC9.72□□□□□ -0.85
Lmo4P61969 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.72□□□□□ -0.85
Lmo4P61969 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC9.72□□□□□ -0.85
Lmo4P61969 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.72□□□□□ -0.85
Lmo4P61969 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Lmo4P61969 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Gm23045-201ENSMUST00000175041 96 ntBASIC9.72□□□□□ -0.85
Lmo4P61969 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Gm27438-201ENSMUST00000183480 110 ntBASIC9.72□□□□□ -0.85
Lmo4P61969 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.72□□□□□ -0.85
Lmo4P61969 Gm6450-201ENSMUST00000200896 574 ntBASIC9.72□□□□□ -0.85
Lmo4P61969 Gm9463-201ENSMUST00000206707 601 ntBASIC9.72□□□□□ -0.85
Lmo4P61969 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Lmo4P61969 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Lmo4P61969 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Lmo4P61969 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.72□□□□□ -0.85
Lmo4P61969 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Lmo4P61969 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lmo4P61969 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Lmo4P61969 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
Lmo4P61969 Map1b-203ENSMUST00000223725 2669 ntBASIC9.71□□□□□ -0.85
Lmo4P61969 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lmo4P61969 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lmo4P61969 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lmo4P61969 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lmo4P61969 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lmo4P61969 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Lmo4P61969 AC158355.1-201ENSMUST00000215895 1705 ntBASIC9.71□□□□□ -0.85
Lmo4P61969 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.71□□□□□ -0.85
Lmo4P61969 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Lmo4P61969 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC9.71□□□□□ -0.85
Lmo4P61969 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lmo4P61969 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lmo4P61969 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Lmo4P61969 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Lmo4P61969 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.71□□□□□ -0.86
Lmo4P61969 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.71□□□□□ -0.86
Lmo4P61969 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.71□□□□□ -0.86
Lmo4P61969 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC9.71□□□□□ -0.86
Lmo4P61969 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.71□□□□□ -0.86
Lmo4P61969 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.71□□□□□ -0.86
Lmo4P61969 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC9.71□□□□□ -0.86
Lmo4P61969 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Lmo4P61969 Mir8115-201ENSMUST00000184992 119 ntBASIC9.71□□□□□ -0.86
Lmo4P61969 Gm8365-201ENSMUST00000197334 648 ntBASIC9.71□□□□□ -0.86
Lmo4P61969 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.71□□□□□ -0.86
Lmo4P61969 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.71□□□□□ -0.86
Lmo4P61969 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.71□□□□□ -0.86
Lmo4P61969 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC9.71□□□□□ -0.86
Lmo4P61969 AC129219.2-201ENSMUST00000224324 701 ntBASIC9.71□□□□□ -0.86
Lmo4P61969 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Lmo4P61969 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Lmo4P61969 Snora73b-201ENSMUST00000083419 205 ntBASIC9.71□□□□□ -0.86
Lmo4P61969 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms